Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHYQTIIIGAGAAGIGFGSAMQRL---GL--TNFLIIEK-GHIGESFLRWPRT-TQ-----FITP-------SFTTNGFGFPDLNAVIPDTSPAFSFEKEHLSGVEYARYLQLVAAHYNLP--IQNETSVLSIDKR--DSLFVIKTSK------GDFSADYLIMATGEFQNPNTIDIKGAD----LGMHYGQVDNFHIKSDNPFIIIGGNESACDALTHLVYLGNQVELYTDTFGRKESNPDPSISLSPLTKERLKHIQDHKKEYYSISEGKKAIEIKQIGKQYQVTFDDGSTAESFHKPILSTGFLNTCHLIDGIALFEYD-KNQLPIVT--EDDESTIVNNCFLIGPSLRQRDTIFCYIYKFRQRFVPVINHIAQREGIILDEDTLEFFKENQMYLDNLACCDVNCDC |
| 2XVE Chain:A ((3-349)) | ---TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFADYTF----DEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG--------------YKWPENWDE---------RPNLVRVDT----ENAYFADGSS-EKVDAIILCTGYIHHFPF--LNDDLRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYS--F---NMFDAQAWYARDVIMGRLPLPSKEEMKADSMAWREKELTLVTAEEMYTY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -128493 for 2407 contacts (-53.4/contact) +
2D Compatibility (PS) -33129 + (NN) -10750 + (LL) 2244
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -179228.0 ( -74.46 by residue)
QMean score : 0.414
|
|
|