Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MPKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQL--MNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL
2HJQ Chain:A ((1-111))MFTAKLIKGKTYNVMGITFRAG---------VSQTVPKKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGR--NPSDFKNADERIAYILKQIDNKGELEHHHHHH--


General information:
TITO was launched using:
RESULT:

Template: 2HJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 335 11669 34.83 109.05
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 34.83
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.293

(partial model without unconserved sides chains):
PDB file : Tito_2HJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HJQ-query.scw
PDB file : Tito_Scwrl_2HJQ.pdb: