Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLQVMNSPFNQEQAELLNRLLPTLTESQKIWLSGYLSAQSVSAQEAAGTPAAAVSAEAPAPAVSKEVTVLYGSQTGNAQGLAENAGKQLEQSGFQVTVSSMSDFKPNQLKKVTNLLIVVSTHGEGEPPDNALSFHEFLHGRR---------------APKLEDLRFSVLALGDSSYEFFCQTGKEFDQRLEELGGKRISPRVDCDLD--YDEPAAEWLEGVLKGLNEAG-GGSAAPA-PA--AA-----S------------QTGESSYSRTNPFRAEVLENLNLNGRGSNKETRHVELSLEG-SGLTYEPGDSLGVYPENDPELVELLLKEMNWDPEEI--VTLN------------------KQGDVRPLKEALISHYEITVL-TKPLLEQAAQLTGNDE----LRELLAPGNEENVKAYI--EGRDLLDLVRDYGPFSVSAQEFVSILRKMPARLYSIASSLSANPDEVHLTIGAVRYDA---HGRERKGVCSILCAERLQPGDTLPVYVQHNQNFKLPKDPETPIIMVGPGTGVAPFRSFMQEREET-----GAEGKAWMFFGDQHFVTDFLYQTEWQNWLKDGVLTKMDVAFSRDTE-EKVYVQHRMLEH-SAELFEWL-QEGAAVYICGDEKHMAHDVHNTLLEIIEKEGNMSREEAEAYLADMQQQKRYQRDVY
1TLL Chain:A ((9-654))--------------------------------------------------------------AKRVKATILYATETGKSQAYAKTLCEIFK-HAFDAKAMSMEEYDIVHLEHEALVLVVTSTFGNGDPPENGEKFGCALMEMRHEERKSYKVRFNSVS-GPLANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELGGERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIE--SNDRSWKRNKFRLTYVAEAPDLTQGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEMLEERNTALGVISNWKDESRLPPCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLS--KGLQEYEEWKWGKNPTMVEVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNR-IQADDVVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGDVT-MAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIF


General information:
TITO was launched using:
RESULT:

Template: 1TLL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2854 48564 17.02 90.77
target 2D structure prediction score : 0.03
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 17.02
2D Compatibility (Sec. Struct. Predict.) : 0.03
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_1TLL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TLL-query.scw
PDB file : Tito_Scwrl_1TLL.pdb: