Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRF--QRGPVLVVVEDGRISAVDFAGSAC---PDMNLVDLGESTLLPGLVDAHAHLCWDPDGR-PE-----DLA---GDPH-------AVLVGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGHCWFLGGVADSVEELVDAVQERAARGADWIKVMATGGFVTTASDPW-QPQYGSGQLAAVVAAAEQVGLPVTAHAHATA-GIA------------AAVAAGV----DGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYPEMPENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLS---------RHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPA------------GLCDVKAVWRSGTQVPLQASAVGYNTPS |
| 4DZH Chain:A ((12-429)) | -----------EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFFA---DVQAAVYK---QHGFRALVGAVIIDFPTAWA-------SSDDEYFARAGELHDQWR-------DDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTE-------AEIHLCAERGVSVVHCPESNLK---------LASGFCPACALQRASVNLAIGTDGCASNN--DLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSALETQPLHHVLSQLIYAAGRHQVTDVWIAGKPKLVQRELIDM---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -169398 for 3211 contacts (-52.8/contact) +
2D Compatibility (PS) -39419 + (NN) -22083 + (LL) 3644
1D Compatibility (HY) -6000 + (ID) 3850
Total energy: -237106.0 ( -73.84 by residue)
QMean score : 0.407
|
|
|