Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLGDLTNFVEKPLAAVSNIVNTPNSAGRYRPFYLRNLLDAVQGRNLNDAVKGKVVLITGGSSGIGAAAAKKIAEAGGTVVLVARTLEN------------LENVANDIRAIRGNGGTAHVYPCDLSDMDAIAVMADQVLGDLGGVDILINNAGRSIRRSLELSYDRIHDYQRTMQLNYLGAVQLILKFIPGMRERH-FGHIVNVSSVGVQT----RAPRFGAYIASKAALDSLCDALQAETVHDNVRFTTVHMALVRTPMISPTTIY------------------DKFPTLTPDQAAGVITDAIVHRPRRASSPFGQFAAVADAVNPAVMDRVRNRAFNMFGDSSAAKGSESQTDTSELDKRSETFVRATRGIHW |
| 4RGB Chain:A ((21-274)) | ------------------------------------------------GSLDGRVVFITGAARGQGRSHAVMCAEQGANIVGVDICEDIDIVPYKLGTYEELEETARLVEK---TGQEMLFRKADVRDKAVLQEVFDAGVEQFGHIDTVIANAGVVLTNPDER--DASEALRLGLDIMLIGVWNTFQVAIPHMKERGQGGNLIATSSMIALLDLTDGRGGTDAYLTSKLAITGLVRSYALMLAADRIRVNGVAPTNCSTPMITENPALFKVIEENPHLVNAMSTALPDFPMIEPRDVSNAILFLISD--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154533 for 1887 contacts (-81.9/contact) +
2D Compatibility (PS) -24232 + (NN) -9776 + (LL) 6532
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -194409.0 ( -103.03 by residue)
QMean score : 0.533
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