Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPAS--GGSAAQDVVDEILAAGGQAVADGSDISDWDQAANLIQAAVETYGGVDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAASHWRGLSKAGKAPKDIDARIINTSSGAGLQG------SVGQGNYSAAKAGIAALTLVGAAEMRRYGVTVNAIAPAAR-TRMTETVFAEM---M------------AKP---QEGFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGIIRVAEGWAHGPQVDKGVKWDPAELGPVVSDLLAKSRPPVPVYGA |
| 3PXX Chain:A ((6-286)) | -GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA--HLPVQAFADAFDVDFVGVINTVHAALPYLTS-----------GASIITTGSVAGLIAAAQPPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -114448 for 2275 contacts (-50.3/contact) +
2D Compatibility (PS) -27067 + (NN) -9764 + (LL) 2484
1D Compatibility (HY) -11600 + (ID) 3750
Total energy: -164145.0 ( -72.15 by residue)
QMean score : 0.575
|
|
|