Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAIAGKPKGAAQNEAEPINVKSLLP
4M91 Chain:A ((2-154))
SKKENLLAEKVEQLM-EWSSRRSIFRMNGDKFRKF---------IKAPPRNYSMIVMFTALQPQRQCSVSRQANEEYQILANSWRYSSAFSNKLFFSMVDYDEGTDVFQQLNMNSAP-TFMHFPP---------------------KGRPKRADTFDLQRIGFAAEQLAKWIADRTDVHIRVFRL--
General information:
TITO was launched using:
RESULT:
Template:
4M91.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64001 for 1116 contacts (-57.3/contact) +
2D Compatibility (PS) -15567 + (NN) -7420 + (LL) 2000
1D Compatibility (HY) -3200 + (ID) 1450
Total energy: -89638.0 ( -80.32 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_4M91.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M91-query.scw
PDB file :
Tito_Scwrl_4M91.pdb
: