Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRPRFYEPDVQRMAAPLGELFAAVGVR-FVQGSAQRIDVAGKRVEYRDA-EGTLAQLDYDRLVLAAGSGVWRPASVAGID--AAFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGASM-GADLSGLIAEASAELGVEWCLGRSVAAVDAEG----VTLDDGQRIEAKTVVWTVGVRAS-TLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATDDLG-NHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 3IWA Chain:A ((4-348)) | --KHVVVIGAVALGPKAACRFKRLDP-----EAHVTMIDQA-----------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRP-PVEGMDLAGVTPVTNLDEAEFVQHAISA-------GEVSKAVIVGGGFIGLEMAVSLADMWG--------IDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADG---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172158 for 2244 contacts (-76.7/contact) +
2D Compatibility (PS) -29299 + (NN) -5459 + (LL) 9184
1D Compatibility (HY) -12000 + (ID) 3600
Total energy: -213332.0 ( -95.07 by residue)
QMean score : 0.427
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