Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLEMSLPGRERPLQAR----LASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
1PHN Chain:B ((1-172)) | MLDAFAKVVAQADARGEFLSNTQLDALSKMVSEGNKRLDVVNRITSNASAIVTNAARALFSEQPQLI-QPGGMEN---AYTNRRMAACLRDMEIILRYVSYAIIA-------------GDSSILDDRCLNGLRETYQALGVP-------GASVAVGIEKMKDSAIAIAN------------DPS-----GITTGDCSALMAEVGTYFDRAATAVQ-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32757 for 1151 contacts (28.5/contact) +
2D Compatibility (PS) -17794 + (NN) 1002 + (LL) 2884
1D Compatibility (HY) 2800 + (ID) 1000
Total energy: 20649.0 ( 17.94 by residue)
QMean score : 0.035
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