Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIGGAAIDKHGVPLADQTLQRAR-QADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQPREQRVLENGERQAYDTLPYSESEIRRIARVGFDMARVR-------------NNRLCSVDKANVLAS-SQLWREVVEEVA---KDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQG-LRTGDIWSEGCRKVGTREMGDAVVAALKNL |
| 3TY4 Chain:A ((9-364)) | RRIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKV----AGYSSPIVALRKKMGLYANVRPVKSLDGAK---------GKPVDLVIVRENTECLYVKEERMVQN-TPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGD-NFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEF-MGHQDAAADIYTAVDKVLTEGKVLTPDLGG----KSGTNEITDAVLANI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197658 for 2926 contacts (-67.6/contact) +
2D Compatibility (PS) -36547 + (NN) -15143 + (LL) 1276
1D Compatibility (HY) -23200 + (ID) 5950
Total energy: -277222.0 ( -94.74 by residue)
QMean score : 0.516
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