Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVRNQEKAAC--LKLCGNLGQISIFKGDFFDEKLILESVE--ECNVVINLVGILYEV----KEHSFYAVHVGIAEKIARAAKIKN-VSMMIHFSAMGIENS-------------KLSEYAQSKLKGEKAVTAA----FPEAIIIKPSLVFGKEDN--FF-TKFARLAT---IL-PFLPLIGSGTTKFQPICVTDLAEMVYRIINLNKQDKKIYNIGGPKIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRV-MMSSSIEK-STDFEAIKIRPL-SIENVVPEYLKVYKKY |
| 2Z1M Chain:A ((3-335)) | -GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP--EPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEK-GIDRNT-GK------------VIVEVSEEFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219152 for 2517 contacts (-87.1/contact) +
2D Compatibility (PS) -31824 + (NN) -11077 + (LL) 1428
1D Compatibility (HY) 400 + (ID) 2200
Total energy: -262425.0 ( -104.26 by residue)
QMean score : 0.441
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