Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDIKEIREALPHRYPMLLVDRVLEVSEDE-IVAIKNVSINEPFFNGHFPEYPVMPGVLIMEALAQTAGVLEL-SKEENKGKLVFYAGMDKVKFKKQVVPGDQLVMTAKFVKRRGT--IAVVEAIAEVDGKLAAS-GTLTFAIGN
1Z6B Chain:F ((11-152))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSD----NNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFAL--
General information:
TITO was launched using:
RESULT:
Template:
1Z6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102634 for 965 contacts (-106.4/contact) +
2D Compatibility (PS) -14433 + (NN) -3823 + (LL) 148
1D Compatibility (HY) -17600 + (ID) 3300
Total energy: -141642.0 ( -146.78 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6B-query.scw
PDB file :
Tito_Scwrl_1Z6B.pdb
: