Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
FPTDDDDKIVGGYTCAANSIPYQVSLN---SGSHFCGGSLINSQWVVSAAHCYKSRIQVRLGEHNIDVLEGNEQFINAAKIITHPNF-NGNTLDNDIMLIKLSSPATLNSRVATVSLPRSCAAAGTECLISGWGNTKSSGSSYPSLLQCLKAPVLSDSSCKSSYPG-QITGNMICVGFLEGGKDSCQGDSGGPVVCNGQLQGIVSWGY-GCAQKNKPGVYTKVCNYVNWIQQTIAAN
3S9C Chain:A ((1-227))
--------VVGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRNIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKIS--TTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLICNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN
General information:
TITO was launched using:
RESULT:
Template:
3S9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151130 for 1884 contacts (-80.2/contact) +
2D Compatibility (PS) -24378 + (NN) -13828 + (LL) -252
1D Compatibility (HY) -16000 + (ID) 4600
Total energy: -210188.0 ( -111.56 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_3S9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S9C-query.scw
PDB file :
Tito_Scwrl_3S9C.pdb
: