Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRALCSALRQALLLLAAAAELSPGLKCVCLLCDSSNFTCQTEGACWASVMLTNGKEQVIKSCVSLPELNAQVFCHSSNNVTKTECCFTDFCNNITLHLPTASPNAPKLGPMELAIIITVPVCLLSIAAMLTVWACQGRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDLIYDVTASGSGSGLPLLVQRTIARTIVLQEIVGKGRFGEVWHGRWCGEDVAVKIFSSRD-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYHEQGSLYDYLNRN----IVTVAGMIKLALSIASGLAHLHMEIVGTQGKPAIAHRDIKSKNILVKKCETCAIADLGLAVKHDSILNTIDIPQNPKVGTKRYMAPEMLDDTMNVNIFESFKRADIYSVGLVYWEIARRCSVGGIVEEYQLPYYDMVPSDPSIEEMRKVVCDQKFRPSIPNQWQSCEALRVMGRIMRECWYANGAARLTALRIKKTISQLCVKEDCKA |
| 3P86 Chain:A ((32-298)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDIPW-------CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRL--RHPNIVLFMGAVTQPP----NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-----RN-PPIVHRNLKSPNLLVDKKYTVKVCDF---------------------GTPEWMAPEVLRDEP------SNEKSDVYSFGVILWELATL----------QQPWGNL-----NPAQVVAAVGFKCKRLEIPRNLN-----PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152393 for 1894 contacts (-80.5/contact) +
2D Compatibility (PS) -25408 + (NN) -9157 + (LL) 17172
1D Compatibility (HY) -19200 + (ID) 3950
Total energy: -192936.0 ( -101.87 by residue)
QMean score : 0.475
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