Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSRTGPKMEGSGGRVRLKAHYGGDIFITSVDAATTFEELCEEVRDMCRLHQQHPLTLKWVDSEGDPCTVSSQMELEEAFRLARQCRDEGLIIHVFPSTPEQPGLPCPGEDKSIYRRGARRWRKLYRANGHLFQAKRFNRRAYCGQCSERIWGLARQGYRCINCKLLVHKRCHGLVPLTCRKHMDSVMPSQEPPVDDKNEDADLPSEETDGIAYISSSRKHDSIKDDSEDLKPVIDGMDGIKISQGLGLQDFDLIRVIGRG-SYAKVLLVRLKK-NDQIYAMKVVKKELVH-DDEDIDWVQTEKHVFEQASS-NPFLVGLHSCFQTTS-RLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLD-ADGHIKLTDYGMCKEGLGPGDTTS--TFCGTPNYIAPEILRGE---EYGFSVDWWALGVLMFEMMAG-RSPFDIITDNPDMNTEDYLFQVILEKPIRIP-RFLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID---WDLLEKKQALPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDAIKRIDQSEFEGFEYINPLLLSTEESV |
| 1CDK Chain:A ((8-350)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGSEQESVKEFLAKAKEDFLKKWENPAQNTA------H------------------------LDQFERIKTLGT-GSFGRVMLVKHKETG-NHFAMKILDKQKVVK-LKQIEHTLNEKRILQAV--NFPFLVKLEYSFKDN-SNLYMVMEYVPGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHS-LDLIYRDLKPENLLIDQ-QGYIQVTDFGFAKRV-K--G--RTWTLCGTPEYLAPEIILS-KGY--NKAVDWWALGVLIYEMAAGY-PPFFAD-------QPIQIYEKIVSGKVRFPS-HFSSDLKDLLRNLLQVDLTKRFGNLKDG-VNDIKNHKWFA---TTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI-------NEKCGKEFSEF-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206590 for 2582 contacts (-80.0/contact) +
2D Compatibility (PS) -35310 + (NN) -15242 + (LL) 13112
1D Compatibility (HY) -22000 + (ID) 5550
Total energy: -271580.0 ( -105.18 by residue)
QMean score : 0.453
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