Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------MRKEIRNLKIASVLRRAISKVLMEGKVFNKNVVISDVKLSGDLKKADVYIVLSSLSKK-KYNINTVVDEINQSAWLIRKSILSYVDLR--FIPKLVFKADLAFDNFVNISKILSNYT
1F7U Chain:A ((2-135))
ASTANMISQLKKLSIAEPAVAKDSHPDVNIVDLMRNYISQELSKISGVDSSLIFPALEWTNTMERGDLLIPIPRL-RIKGANPKDLAVQWAEK--FPCGDFLEKVEANGPFIQFFFNPQFLAKLVIPDILTRKEDYG
General information:
TITO was launched using:
RESULT:
Template:
1F7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49443 for 756 contacts (-65.4/contact) +
2D Compatibility (PS) -11408 + (NN) 3516 + (LL) 272
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -63913.0 ( -84.54 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_1F7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F7U-query.scw
PDB file :
Tito_Scwrl_1F7U.pdb
: