Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKTTKNLLITEINKILPE--DSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSSLNEG---SNKRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATD-KQRRALYNYGVNLGLIFQAKDDIRDYKQDEV--NNLMSMLSKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQVKRDD |
| 3LSN Chain:A ((9-293)) | ----SSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGL----------------------------------KLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLPTYPALLGLAAAKEYALELRDQALHALRPFDAAAEPLRELARYIVE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LSN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180010 for 2296 contacts (-78.4/contact) +
2D Compatibility (PS) -28157 + (NN) -10805 + (LL) 2112
1D Compatibility (HY) -12000 + (ID) 4400
Total energy: -233260.0 ( -101.59 by residue)
QMean score : 0.548
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