Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPIQISEPNSNEVVFGIDLGTTNSLIAVVNKAGNVEIFTDEQGRELLPSVISYENNTLKTGYDV------D-QNAIYPIKRLMGKSVEDL--NKE--GINLEIDNESEKIIRVKCS---EDKYLTPIEISAEILKALCERVKKSTGMEVRKAVITVPAYFDDSARNATKYAAKLAGIEVLRLINEPTAAALSYSIAKNN------NSGIYAVYDLGGGTFDISILKLHQGVFQVLAVGGDTKLGGDDFDHLLSMIILDKYRKKV----GKDLNSLKHLSTKSRSIKEHLSKNISSTFEFNI--NGELFKCKITKEEFEQTISSLVNKTINIVTHTISNIDLKIEDIEGVILVGGATRVPLVQSSLVKLFGNKVLNDVDPDKAVAIGAALQAHYLTSN-SKDRNVLLDVLPLSLGIETMG----GIVEKIIPRNTPLPVSETREFTTYIDGQTAIKI-HVCQGEREIIEDNKSLAQFELKGIPQLPA-GSARVEIEFIVNVDGILTVTAR----EKTTGIEQTVEINS-SFGLSEADIQDMVNQSINNFDEDMKARSLAEAKINGNKLIHLVESN-DN-------LSTDKNLKNLLQNTKNALQGN----DLNEINNAITELESFSLELCESTNK |
| 3D2F Chain:A ((2-625)) | ------------STPFGLDLGNNNSVLAVAR-NRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLP---PNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -235195 for 4620 contacts (-50.9/contact) +
2D Compatibility (PS) -61718 + (NN) -19743 + (LL) 916
1D Compatibility (HY) -24800 + (ID) 5950
Total energy: -346490.0 ( -75.00 by residue)
QMean score : 0.541
|
|
|