Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYKIDDKQDQRLVNDTLNQIDIP-EGYILHSDQGSVYTSYAYYQLCEEKGIIRSMSRKGTPADNAPIESFHSSLKSETLYINNQLNSSNHIVIDIVEKYIKNYNNNQIQQKLGYLSPVKYRELIA
3F9K Chain:A ((93-203))
--------ESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIRE----QANTIETIVLMAVHCMNF-KRRGGIGDMTPSERLIN--
General information:
TITO was launched using:
RESULT:
Template:
3F9K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 757 for 645 contacts (1.2/contact) +
2D Compatibility (PS) -11716 + (NN) -4799 + (LL) 1080
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -15328.0 ( -23.76 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_3F9K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F9K-query.scw
PDB file :
Tito_Scwrl_3F9K.pdb
: