Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKFENVTKSFKDGNRNIEAVKDTNFEINKGDIIALVGPSGSGKSTFLTMAGALQTPTSGHILINNQDITTMKQKALAKVRMSEIGFILQATNLVPFLTVKQQFTLLKKKNKNVMSNEDYQ-QLMSQLGLTSLLNKLPSEISGGQKQRVAIAKALYTNPSIILADEPTAALDTENAIEVIKILRDQAKKRKKACIIVTHDERLKAYCDRSYHMKDGVLNLENETVE
3BK7 Chain:A ((378-531))
--------------------------EIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKV---EWDLTVAYKPQYIKAEYEG--------------TV---YELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHD--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59265 for 1102 contacts (-53.8/contact) +
2D Compatibility (PS) -16699 + (NN) -7825 + (LL) 5260
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: -94529.0 ( -85.78 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_3BK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BK7-query.scw
PDB file :
Tito_Scwrl_3BK7.pdb
: