Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
3HVU Chain:A ((27-203))
-NQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGRKVDLKADYVGFTVPHEFVVGYGLDYKEQYRNLPYVGVLKPSVYS-
General information:
TITO was launched using:
RESULT:
Template:
3HVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126047 for 1384 contacts (-91.1/contact) +
2D Compatibility (PS) -19100 + (NN) -3455 + (LL) 128
1D Compatibility (HY) -21200 + (ID) 4900
Total energy: -174574.0 ( -126.14 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3HVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HVU-query.scw
PDB file :
Tito_Scwrl_3HVU.pdb
: