Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIAAAIAIGLSALGAG----------IGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG
3ZK1 Chain:R ((4-77))
--LTAKTIVLGCSAVGAGLAMIAGLGPGIGEGYAAGKAVESVARQPEARGSIISTMILGQAVAESTGIYSLVIALI----
General information:
TITO was launched using:
RESULT:
Template:
3ZK1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22021 for 304 contacts (-72.4/contact) +
2D Compatibility (PS) -6303 + (NN) 30 + (LL) 284
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -35510.0 ( -116.81 by residue)
QMean score : 0.026
(partial model without unconserved sides chains):
PDB file :
Tito_3ZK1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZK1-query.scw
PDB file :
Tito_Scwrl_3ZK1.pdb
: