Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE
1Z34 Chain:A ((1-233))
---ATPHNSAQVGDFAETVLMCGDPLRAKLIAETYLENPKLVNNVRGIQGYTGTYKGKPISVMGHGMGLPSICIYAEELYSTYKVKTIIRVGTCGAIDMDIHTRDIVIFTSAGTNSKINRIRFMDHDYPATASFDVVCALVDAAKELNIPAKVGKGFSTDLFYNPQTELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILHHEE-----RQNSFQNMMKIALEAAI
General information:
TITO was launched using:
RESULT:
Template:
1Z34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160050 for 2046 contacts (-78.2/contact) +
2D Compatibility (PS) -24228 + (NN) -8640 + (LL) 496
1D Compatibility (HY) -19200 + (ID) 5300
Total energy: -216922.0 ( -106.02 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1Z34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z34-query.scw
PDB file :
Tito_Scwrl_1Z34.pdb
: