Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHIEISKDVKIPVLGFGVFQIPQ---EQTAEAVKEAIKAGYRHIDTAQSYLNETEVGQGIEAS----GIDRSELFITTKVWIENVNYEDTIKSIERSLQRLNLDYLDLVLIHQPYN---------------------DVYGSWRALEELKENGKIKAIGVSNFGVDRIVDLGIHN--QIQPQVNQIEINPFHQQEEQVAALQQENVVVEAWAPFAEGKNQ---------LFQNQLLQAIADKYNKSIAQVILRWLVERDIVVLAKSVNPERMAQNLDIFDFELTEEDKQQIATLEESNSQFFSHADPEMIKALTSRELDV |
| 1S1P Chain:A ((6-308)) | -QCVKLNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKRWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTAEDMKAIDGLDRN-LHYFNS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128387 for 2250 contacts (-57.1/contact) +
2D Compatibility (PS) -29051 + (NN) -12962 + (LL) 1476
1D Compatibility (HY) -22800 + (ID) 4500
Total energy: -196224.0 ( -87.21 by residue)
QMean score : 0.523
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