Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIA----------FMPCNPSVGGPA----KGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRE-LGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNA-ETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKF------VRFN-------------DKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIV-PTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEE--RYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSD |
| 3G5S Chain:A ((1-427)) | ---MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP-KRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEAADLAR----------VPA--GGALAVDREEFSGYITERLTGHPLL------------------EVVREEVREIPPGITVLATGPL--------------------TSEALAEALKRRFGDHFLAYYDAASPIVLYESIDLTKCFRAGRY----------------YLNCPMTEEEYRRFHQALLEAQRHTPH---------FEACVPVEELARRGYQTLLFGPMKPVGLVDPRTGKEPFAVVQLRQEDKAGRMWSLVGFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAEGLYAAGVLAGVEGYLESAATGFLAGLNAARKALGLPPVAP-PEESMLGGLVRYLATANPEGFQPM-----------------------YANWGLVPPVEGRMGKKEKRQAMYRRGLEAFSAW------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -105770 for 3293 contacts (-32.1/contact) +
2D Compatibility (PS) -40190 + (NN) -11790 + (LL) 18948
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -156402.0 ( -47.50 by residue)
QMean score : 0.362
|
|
|