Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYFLEQTDSEIFEFIVEEFKRQNEHLEMIASENYTFPSVMEAMGSILTNKYAEGYPNKRYYGGCEVVDKIESLAIERAKKLFNCQF----ANVQAHSGSQANNAVYHALLKLYDKILGMDLSCGGHLTHGAK-------VSLTGKHYQSFSYGVGL-DGYIDYEEALKIAQSVKPQIIVCGFSAYPREIDFKKFREIADAVGALLLGDIAHVAGLVVANEHAHPFPHCHVVSSTTHKTLRGPRGGLILTNDEE-------IAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYAKLVKSNMQVLAKTLKEKNHKLVSGGTSNHLLLMDFLDKPYSGKDADIALGNAGITVNKNTIPGETRNPFVTSGIRIGSAALSARGMGAKEFEIIGNKISDILNDINNV------------------------SLQLHVKEELKTMANQFPVYHQPIF |
| 1RV3 Chain:A ((21-481)) | LAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIF--FESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRRGVRSEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDK-SALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPGLPGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RV3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173536 for 3608 contacts (-48.1/contact) +
2D Compatibility (PS) -44251 + (NN) -20789 + (LL) 208
1D Compatibility (HY) -28000 + (ID) 8600
Total energy: -274968.0 ( -76.21 by residue)
QMean score : 0.469
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