Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWVLKGVYFDECLKKG-KNHIITTVAEHPAVRSTCNFLESL-GVEVTYLPINEHGSITADQVKEAITEK--TALVSVMWANNETGLIFPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSGTLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLK-IPDVMVVG-DRVHRVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
4ISY Chain:A ((12-398)) | ---SAYLDHAATTPMHPAAIEAMAAVQR-TIGNASSLHTSGRSARRRIEEARELIADKLGAR-PSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSP--------SHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALA- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -220660 for 3384 contacts (-65.2/contact) +
2D Compatibility (PS) -40904 + (NN) -19031 + (LL) 1068
1D Compatibility (HY) -23200 + (ID) 7300
Total energy: -310027.0 ( -91.62 by residue)
QMean score : 0.499
|
|
|