Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGD--ETLVRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
1YYA Chain:A ((1-249))MRRVLVAGNWKMHKTPS-EARVWFAELKRLLP-PLQSEAAVLPAFPILPVAKEVLAETQVGYGAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRIA-----


General information:
TITO was launched using:
RESULT:

Template: 1YYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129463 for 2161 contacts (-59.9/contact) +
2D Compatibility (PS) -26792 + (NN) -9159 + (LL) 44
1D Compatibility (HY) -12400 + (ID) 3950
Total energy: -181720.0 ( -84.09 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_1YYA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YYA-query.scw
PDB file : Tito_Scwrl_1YYA.pdb: