Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTETIIRFENVTKQFDNDPPVLDNVSFEIEKGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYLGDKVINQIPANKRPVNTVFQDYALFPHLNVYENVAFGLRIKKLKKEAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILLDEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQSGTPIDIYDEPINKFVADFIGES--NIVNGKMIQDFEVEFVERRFECVDQ----GFRPNEVVEVVIRPEDLEITSAE----KGQLQVTVDWMLFRGVHYEVGCIDIDGNEWLVH--TTRKVRVGDKIGLAFEPEAIHVMRLGETEEEFDKRLDSYDEVQ |
| 1V43 Chain:A ((10-369)) | --MVEVKLENLTKRFGN-FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQ------HMTVYENIAFPL--KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMNILEVSVGDGYL-EGRGFRIELPQ-MDLLKDYVGKTVLFGIRPEHMTVEGV-HMKRTARLIGKVDFVEALGTDTILHVKFGDE-LVKVKLPGHIPIEPGREVKVIMDLDMIHVFDKDTE--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190371 for 2627 contacts (-72.5/contact) +
2D Compatibility (PS) -37187 + (NN) -16642 + (LL) 2172
1D Compatibility (HY) -26400 + (ID) 6550
Total energy: -274978.0 ( -104.67 by residue)
QMean score : 0.557
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