Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDP---ITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK
3KTK Chain:L ((22-189))
----------------RLLKDRIIMLGSAIDDNVANSIVSQLLFLAA--EDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL-------
General information:
TITO was launched using:
RESULT:
Template:
3KTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115693 for 1286 contacts (-90.0/contact) +
2D Compatibility (PS) -18185 + (NN) -5443 + (LL) 1456
1D Compatibility (HY) -14800 + (ID) 3650
Total energy: -156315.0 ( -121.55 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3KTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KTK-query.scw
PDB file :
Tito_Scwrl_3KTK.pdb
: