Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQLFSAFDRETIERNLQEEKFDLVIVGGGITGAGIALDATSRGM-SVALVEMGDFASGTSSRSTK--LVHGGLRYL----QQFEIKEVADLGKERAIVYENGPHVTTPEWMMLPFHKGGNMGKTTASFGIRLYDYLAGVKKNERRKILSAKETLAKNPFVKK----DGLKGSGYYVE-YRTDDARLTIEVMKKAVELGANAINYTK---AEHFLYDDNKQVVGVTVTDRLSGKAYDIKGHRVINAAGPWVDKVRKLDYATNNKHLRLTKGIHLVIDKQKFP----MEQAVYFDTPDGRMVFAIPR-D-KKVYVGTTDTVYDE---A--------VIN-PKALESDHNYVIKAINYMFPDVHITEKDIESSWAGVRPLIYEEGKDPSEISRKDEVWFSESGLITMAGG---KLTGYRKMAEKLLDDVSKTLAKETGKKYKTVQTKHLPISGGDIGGSEQLEAFLSKKAKEGNNRFGWTLEEGREMAKRFGSNIDQLFTYAQEHKEQNETTLPNSLYAELRYSIQHEAVTTPIDFLLRRTGYLLFDMPYLLEWKDAVVDEMAKQFHWSDDVKQTYIEELNIQINDAREPADWHDR |
| 3DJE Chain:A ((4-385)) | ------------------TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKNDPLF-KPYYHDTGLLMSACSQE-----GLDRLGVRVRPGE---DPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADG-----KIWRAERTFLCAGASAGQFLDF-----KNQLRPTAWTLVHIALKPEERALYKNIPVIFN-I-ERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMSIPFEKTQIPKEAETRVRALLKETMPQ--LADRPFSFARICWCADTANREF---LIDRHPQY----HSLVLGCGASGRGFKYLPSIGNLIVDAMEGKV------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76742 for 2872 contacts (-26.7/contact) +
2D Compatibility (PS) -36491 + (NN) -6801 + (LL) 13328
1D Compatibility (HY) 0 + (ID) 2250
Total energy: -108956.0 ( -37.94 by residue)
QMean score : 0.391
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