Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLS--FETRIALINQISFSSGAEGMVGGQLADLEAEN---KQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSALSGHD-FDDEILLKLADLIALREN |
| 2J1P Chain:A ((13-292)) | ---PISYIIRKADSVNKALDSAV-PLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS---LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTK----------------KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109139 for 2260 contacts (-48.3/contact) +
2D Compatibility (PS) -29113 + (NN) -17793 + (LL) 856
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -177839.0 ( -78.69 by residue)
QMean score : 0.499
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