Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLEKVNEAVAKIRESYT-GTPKIGLILGSGLGVLADEVNQPIKLSYSEIPHFPVSTVEGHAGQFVFGELENKEVVAMQGRFHFYEGYSMQDVTFPVRVMKELGVEVLIVTNAAGGVNELYSAGDLMLISDHINFTGT---SPLIGPNDEHFGPRFPDMSEAYNLALRVDARLIAQELNL--TIREGVYAGFSGPTYETPAEIQMMRTLGADAVGMSTVPEVIIANHAGLRVLGISCITNMAAGILD--QPLSHTEVIETTDQVRSTFLQYVKAIVAKIS |
3FUC Chain:A ((5-283)) | YTYEDYQDTAKWLLS-HTEQRPQVAVICGSGLGGLVNKLTQAQTFDYSEIPNFP--------GRLVFGILNGRACVMMQGRFHMYEGYPFWKVTFPVRVFRLLGVETLVVTNAAGGLNPNFEVGDIMLIRDHINLPGFSGENPLRGPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMASIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186805 for 2257 contacts (-82.8/contact) +
2D Compatibility (PS) -28078 + (NN) -7845 + (LL) 500
1D Compatibility (HY) -25200 + (ID) 6300
Total energy: -253728.0 ( -112.42 by residue)
QMean score : 0.563
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