Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
1Z6B Chain:F ((11-152))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSD----NNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFAL-----
General information:
TITO was launched using:
RESULT:
Template:
1Z6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96161 for 964 contacts (-99.8/contact) +
2D Compatibility (PS) -14098 + (NN) 468 + (LL) 436
1D Compatibility (HY) -18000 + (ID) 3300
Total energy: -130655.0 ( -135.53 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6B-query.scw
PDB file :
Tito_Scwrl_1Z6B.pdb
: