Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLED-----NYWYTAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGYGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHS-NGDFLNRDNIEHFVNYAAFCFEEFP-EVNYWTTFNEIGPIGDGQYLVGKFPPGIQYD-----------LAKVFQSHHNMMVSHARAVKLYKDKG---YKGEIGVVHALPTKYPLDPENSADVRAAELEDIIHNKFILDATYLGYYSEMTMAGVKHILKENGGELDLREEDFQALEAAKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVG--RRVAPDYVPKTDWDWI-IYPQGLYDQIMRVKNDYPNYKKIYITENGLGYKDEF-VDNT-VYDDGRIDYVKQHLEVLSEAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET-QERYPKKSAHWYKQVAKTQIIE |
| 2DGA Chain:A ((71-546)) | -RDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHLYEEDVKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCSPGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQDS-FLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPM------FTKEE---QEKLASSCDIMGLNYYTSRFSKHVDMSPDF---TPTLN--TDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLTDLLLIMKEKYGN-PPVFITENGIADVEGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGADVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKFNSVPKP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149133 for 4037 contacts (-36.9/contact) +
2D Compatibility (PS) -47194 + (NN) -11495 + (LL) 568
1D Compatibility (HY) -26000 + (ID) 7250
Total energy: -240504.0 ( -59.57 by residue)
QMean score : 0.696
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