Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMMKYEAVIIGGGPVGFMLASELAIAGVGTCVIERLEKPVPHSKALTLHPRTLELLEMRGILERFVSKGSKIPTGHFSMLDTRLDFSGLDTSCPYTLLLPQSKTEKLLEDHARSLGTEVFRGAEALAVTQNGEAVQTIFKDRDGSVRTITSKFAVGADGAGSTVRKQAKIEFPGTDSTVTAALGDVVLLSPPPSGVLSLCTKEGGVMIVPLSPDRYRVVVISPYRTQTPKDVPVTEEELKADLLRICGTDFGLTDPSWMSRFGNAARQAKRYRDGRIFLAGDAAHIHFPAGGQGLNVGLQDAMNLGWKLAAAIKGSAPSWLLDSYHDERHPAAEGLLRNTEAQTKLIDFTQAGLHLRSMMSELLAFPDVNRYVAGQISALDVRYEADRTMPPNRLNGARLPDMKLILSDGNSERLYSFLQNGTFVLLSLRQEADDH---IEVKGLRTVTA---SLAEPNEKLRNVHTILIRPDGHVAWAVDASAPDCSEVIQKGISRWFSVTSRV
2QA1 Chain:A ((8-496))HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQG-HFGGL--PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGP-EGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE-LQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPP-----PPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLSGPEVQPLRDVLTELIQYGEVARHLAGMVSGLEITYDVGT--GSHPLLGKRMPALELTT-ATRETSSTELLHTARGVLLDLADNPRLRARAAAWSDRVDIVTAVPGEVSATSGLRDTTAVLIRPDGHVAWAAPGSH--H-DLPM-ALERWFGA----


General information:
TITO was launched using:
RESULT:

Template: 2QA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2870 -259814 -90.53 -543.54
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -90.53
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_2QA1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QA1-query.scw
PDB file : Tito_Scwrl_2QA1.pdb: