Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYPYKEHKPDIHPTAFIADNATITGDVVIGEQSSIWFSVVIRGDVAPTRIGNRVNIQDLSCLHQSP-------NKTLLIEDDATIGHQVTLHSAVIRKNALIGMGSIILDGAEIGEGAFIGAGSLVPPGKIIPPGHLAFGRPAKVIRPLTEEDRKDMQRIRSEYVEKGQYYKFLQQT
3R3R Chain:A ((10-182))---PYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGLQYSANNYVKWKDDYLSQD--


General information:
TITO was launched using:
RESULT:

Template: 3R3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 973 -50365 -51.76 -303.40
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -51.76
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3R3R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3R3R-query.scw
PDB file : Tito_Scwrl_3R3R.pdb: