Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYRF-QRGPVLVVVEDGRISAVDFAGSA--CPDMNLVDLGESTLLPGLVDAHAHLCWDPD-GR---PEDLAGDPHAVLVGRARRHAAAALRSGITTIRDLGDRDYAALALREEYRQKTTVGPELVVSGPPLTRSGGHCWF-L---------------GG----------VADSVEELVDAVQERAARGADWIKVMATGGFVT------TASDPWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATAGIAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIP--RVYP--EM-PENLVAVV-QDGWRNIRRLIDAGARVALSTDAGVAPGRRHDV---------------L-PDDLVYLSRHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPAGLCDVKAVWRSGTQVPLQASAVGYNTPS |
4WHB Chain:E ((3-450)) | --------------TIAITNVTLIDGLGGLPRPATTVIVEGDRFATVGPSDSTPVPEGATVVDGNRRWMVPGYVNGNVHLLDAWMFMAGPGTIEYLARWEGRYVEVIEEAAQLALRNGVTTVFDTHNAIEPVLAARDRINAGISQGARIFAAGTIVGMGGPFSADFHFAGRTAATRTFVDRIDSMFEAGVGHQLSLLPRKEVRARVRDYLSRGVDMLKIAVSDHIVFTLVDRSVGFDRSYQTFSRPVLEVMVEEARAAGVPVLTHSVSVEALDTSVELGADVLIHANYTLGQEI--PNYLIDKIVASDSWAGLQTVHDQHRQGLEDVGSWAAALAGEPYATNERNLISANAKILLNTDAGCPSKDHLADLSPVEREDRPWTIGNDHFHWTQSMVEKGMSPLEAISAATINVARAYGKADQIGSVETGKLADFVLLDQDPVDDIRNLRSITEVFQAGAAVDRAAL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197641 for 3385 contacts (-58.4/contact) +
2D Compatibility (PS) -42337 + (NN) -21370 + (LL) 848
1D Compatibility (HY) -8800 + (ID) 4300
Total energy: -273600.0 ( -80.83 by residue)
QMean score : 0.436
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