Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDHKVPFNRPYMTGRELAYIAEAHSCGHL-AGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEGGALLVNS
1B9H Chain:A ((11-201))
--------AWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFP-
General information:
TITO was launched using:
RESULT:
Template:
1B9H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126669 for 1556 contacts (-81.4/contact) +
2D Compatibility (PS) -20869 + (NN) -9819 + (LL) 368
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -169989.0 ( -109.25 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_1B9H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B9H-query.scw
PDB file :
Tito_Scwrl_1B9H.pdb
: