Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQNPL--THLDKLITYTSDDIRSISPVAQQHV-QTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA
4GNU Chain:A ((21-282))----------------------------------------KLTFKTDLEKLEREKAAQIGVAIVDPQGEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSPATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREIGGP----AAMTQYFRKIGDSVSRLDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGGALTSTSTHTIERWLIGNQTGDATLRAGFPKDWVVGEKTGTCANGGRNDIGFFKAQE-RDYAVAVYTTAP--KLSAVERDELVASVGQVITQLI-


General information:
TITO was launched using:
RESULT:

Template: 4GNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135005 for 2340 contacts (-57.7/contact) +
2D Compatibility (PS) -28349 + (NN) -17631 + (LL) 2036
1D Compatibility (HY) -16400 + (ID) 4800
Total energy: -200149.0 ( -85.53 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4GNU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GNU-query.scw
PDB file : Tito_Scwrl_4GNU.pdb: