Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTAAPRWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLRTAARRCPEATFLP-------SNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGT-------PDD----------------------------------------------------PIEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIMGDRTVEALWGVGPKTTK-RLAKLGINTVYQLAHTDSGLLMSTFGPRTALWL-LLAKGGGDTEVSAQAWVPRSRSHAVTFPRD--LTCRSEMESAVTELAQRTLNEVVAS----SRTVTRVAVTVRTATFYTR---TKIRKL--QAPSTDPDVITAAARHVLD---LFELDRPVRLLGVRLELA |
| 4ECQ Chain:A ((5-431)) | -ATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWK--GGGIIAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYIEGLPQGPTVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDPVKPR-QLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTVIKNCNTSGIQTEWSPPLTMLFLCATK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ECQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181495 for 2646 contacts (-68.6/contact) +
2D Compatibility (PS) -36696 + (NN) -14092 + (LL) 552
1D Compatibility (HY) -13200 + (ID) 4250
Total energy: -249181.0 ( -94.17 by residue)
QMean score : 0.463
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