Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPRPDPDELARRAAQVIADRTGIGEHDVAVVLGSGWLPAVAALGSPTTVLPQAELPGFVPPTAAGHAGELLSVPIGAHRVLVLAGRIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLRADLQVGQPVLISDHLNLTARSPL------VGGEFVDLTDAYSPRLRELARQSD----PQLAEGVYAGLPGPHYETPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITG-EPLSHAEVLAAGAASATRMGALLADVIARF |
| 4NSN Chain:A ((26-295)) | -------QEQHYHEAASFLSSRLP-GDAKTAIILGSGLGELAEKIENK-TVIPYNEIPHFAQATAVGHKGNIIGGILGGTPVVAMQGRFHYYEGYSMDQVTFPIRVMKLLGIENLFVSNAAGGINTSFKVGDLMIICDHINNLPNPLIGPNMDMFGVRFPDMTRAYDREFIAKAKGIAQELNIPVKEGVYVGLTGPSYETPAEYKFWGQVGGDAIGMSTVPEVIVARHTGIRVFGMSVITNEGYHFADDFVNDEQDVIRAANAASEKMGAIFARLIAAV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4NSN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -182717 for 2312 contacts (-79.0/contact) +
2D Compatibility (PS) -28093 + (NN) -8011 + (LL) 276
1D Compatibility (HY) -19600 + (ID) 4500
Total energy: -242645.0 ( -104.95 by residue)
QMean score : 0.691
|
|
|