Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRP-R-FYEPDVQR-----MAAPLGELFAAVGVRFVQG-SAQRIDVAGKRVEYRDAEGTLAQLDYDRLVLAAGSGVWRPASVAGID--AAFDVDQLEDALRLEAHLHALRDLPDSPARNTVVVAGGGFTGIETATEMPARLRAILGEKAALRVIVVDRGAAIGASM-GADLSGLIAEASAELGVEWCLGRSVAAVDAE-----GVTLDDGQRIEAKTVVWTVGVRAST-LTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVARAATD-DLG-NHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA |
| 3LXD Chain:A ((9-321)) | -RADVVIVGAGHGGAQAAIALRQNGF-----EGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGD----GSAIEYGKLIWATGGDPRRL-SCVGADLAGVHAVRTKEDADRLMAELD--------AGAKNAVVIGGGYIGLEAAAVLTKFG---------VNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGAS--GGNGVDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194415 for 2454 contacts (-79.2/contact) +
2D Compatibility (PS) -31468 + (NN) -7244 + (LL) 7408
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -242269.0 ( -98.72 by residue)
QMean score : 0.403
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