Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLGQAPVRVLSLPTHADRVD--DAEVLSVLRQLQAA-EREGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
2G6Z Chain:A ((4-143))
----------------------------------------------MGPVEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTSEA--CMTHLHYKWIPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNF-GFMGQLLQYESE--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2G6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51062 for 1106 contacts (-46.2/contact) +
2D Compatibility (PS) -15372 + (NN) -13408 + (LL) 6500
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -80192.0 ( -72.51 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2G6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G6Z-query.scw
PDB file :
Tito_Scwrl_2G6Z.pdb
: