Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLPLDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKG-TPITVFGDGEQTRDFIYVADLVDFLVQALEAT---AVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADARAGDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR
3KO8 Chain:A ((1-304))---MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---NPSAELHVRDLKDYSWGA--GIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVI-PTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH-----GVIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLV----GDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAE-


General information:
TITO was launched using:
RESULT:

Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168198 for 2576 contacts (-65.3/contact) +
2D Compatibility (PS) -30673 + (NN) -9292 + (LL) 708
1D Compatibility (HY) -16400 + (ID) 4550
Total energy: -228405.0 ( -88.67 by residue)
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_3KO8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KO8-query.scw
PDB file : Tito_Scwrl_3KO8.pdb: