Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSTIHPLPSFGLGTFRLTGQVVVDSVRSALELGYRAIDTAQIYGNEADIGRAIAESGVPRSELFLTTKVWVDNYAREKLLASLRESLEKLRTDRLDLVLIHWPAPGNGVELGEYMAALAEAKSLGLTRRIGVSNFNIELTRQAIAAVGAGEISTNQIELSPYLQNRALTAYLEEQGIAVTSYMTLAYGKVLKDPTLAGIAARHRATVAQVALAWAMQL-GYAVIPSSTRRENLASN-LLARDLRLDAEDMARIAGLERN-GREVSPQGLAPAWD |
| 3UP8 Chain:A ((27-297)) | VSSNGANIPALGFGTFRMSGAEVLRILPQALKLGFRHVDTAQIYGNEAEVGEAIQKSGIPRADVFLTTKVWVDNYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDV--PMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSD-APIATNQVEYHPYLDQTKVLQTARRLGMSLTSYYAMANGKVPADPLLTEIGGRHGKTAAQVALRWLVQQQDVIVLSKTATEARLKENFAIFD-FALTREEMAAVRELARPNGRIVNPQGLAPEWD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144509 for 2336 contacts (-61.9/contact) +
2D Compatibility (PS) -29431 + (NN) -15888 + (LL) 88
1D Compatibility (HY) -22800 + (ID) 6100
Total energy: -218640.0 ( -93.60 by residue)
QMean score : 0.571
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