Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEI-GEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQAAKA
3TJT Chain:A ((4-204))
NKFKVKPLPYAYDALEPYIDKETMKLHHDKHYQAYVDKLNAALEKYPELYNYSLCELLQNLDSLPKDIATTVRNNAGGAYNHKFFFDIMTPEKTIPSESLKEAIDRDFGSFEKFKQEFQKSALDVFGSGWAWLVATKDGKLSIMTTPNQDSPVSKNLTPIIGLDVWEHAYYLKYQNRRNEYIDNWFNVVNWNGALENYKNL--
General information:
TITO was launched using:
RESULT:
Template:
3TJT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113012 for 1577 contacts (-71.7/contact) +
2D Compatibility (PS) -20839 + (NN) -6007 + (LL) 208
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -164400.0 ( -104.25 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_3TJT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJT-query.scw
PDB file :
Tito_Scwrl_3TJT.pdb
: