Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSKGVESRKRLLKAAANEFSVRGFHDAKVSEIVKKAGFTQPSFYLYFQSKEAIFAELITDFHSRVRKLTESLLLENGLNTEDVSKRVLLAVETVFQFLDEDKDLTKIGFF----------LNPEAKQMKKDLAMVLKENLEAEQRLGYFHSELDMETVAECLVGMIEHLTESFLLTGIK-DPASLAAEVVNLLIYGMLPKGNDVR
2UXU Chain:A ((5-210))TKEEAQETRAQIIEAAERAFYKRGVARTTLADIAELAGVTRGAIYWHFNNKAELVQALLDSLHETHDHLARASESEDEVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGELDAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSPALRK


General information:
TITO was launched using:
RESULT:

Template: 2UXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 718 -92321 -128.58 -473.44
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -128.58
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_2UXU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2UXU-query.scw
PDB file : Tito_Scwrl_2UXU.pdb: