Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKTDRHPVSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLYRTFLRMKVGKQTSFALMVMPDIMFPEKISVGTNTIIGYNTTILAHEYLIHEYRIGKVLIGDEVMIGANTTILPGVKIGDGAVVSAGTLV--HKDVPDGAFVGGNPMRII--YTKEEMQERLKKSAE
1V3W Chain:A ((61-157))------------------------------------------------------------------------------NVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPGKVVRQLTEEEI-EWTKKNAE


General information:
TITO was launched using:
RESULT:

Template: 1V3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 503 -64572 -128.37 -694.32
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -128.37
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_1V3W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V3W-query.scw
PDB file : Tito_Scwrl_1V3W.pdb: