Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLETPKKFRSLANQAHQVAENYFRPISRKYDKAEHAYPKELDLLAALLDG--MNSGSPEAVGATSASKRAGKQVEEGIKNGGNLSALLGVMELCWGDVGLLLAMPRQ-GLGNAAIAAVANEEQLQRF------GGTWAAMAITEPGCGSDSAAIRTTATQDGD-HYVLNGEKIFVTSGERADAVVVWATLN--RNLGRAAIKSFVVEKGTPGMTVTRLEKKLGIKASDTASISFNDCRVPAANLLGNAEVDVQKGFAGVMETFDNTRPLVAGMAVGVAKAALDRTRELLKKAGCKFDYRKPLLTVSHAEATLYRLEAEWEAARLLTLKAAWMADNKLPNSKEASIAKAKAGRVANEITLKCVELAGALGYAEDELLEKWARDSKILDIFEGTQQIQLLIVARRLLGKSSSQLK |
| 1BUC Chain:A ((1-383)) | MDFNLTDIQQDFLKLAHDFGEKKLAPTVTERDHKGI-YD--KELIDELLSLGITGAYFEEKYGG------------SGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKS--KGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEG----KGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQ---RVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140216 for 3304 contacts (-42.4/contact) +
2D Compatibility (PS) -41262 + (NN) -24094 + (LL) 1884
1D Compatibility (HY) -20400 + (ID) 6450
Total energy: -230538.0 ( -69.78 by residue)
QMean score : 0.464
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